Detail view for swissprot protein NR1H3_HUMAN and isoform Q13133-2
Template: 1uhl
Sequence Identity (Template - Swissprot): 0.6727273
Coverage of swissprot protein: 0.86129755
Alignment
NR1H3_HUMAN -----------------------------------MSLWLGAPVPD---IPPDSAVEL----WK----PGAQDASSQAQGGSSCILREEARMPHSAGGTA 1uhl EMPVDRILEAELAVEQSPNDPVTNICQAADKQLFTLVEW-AKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGI--LLATGLHVHRNSAHSA SSE CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH-HHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE--ECCCCCEEEHHHHHHH VARSPLIC NR1H3_HUMAN GVGLEAAEPTALLTRAEPPSEPTEIRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKGAHYICHSGGHCPMDTYMRRKC--QE 1uhl GVG-------AIFDRVL-----TELVSKMRDM----RMDKTEL--GC------LRAIILFNPDAKGLSNPSEVEVLR----EKVYASLETYCKQKYPEQQ SSE CCH-------HHHHHHH-----HHCHHHHHHC----CCCHHHH--HH------HHHHHHCCCCCCCCCCHHHHHHHH----HHHHHHHHHHHHHHCCCCC VARSPLIC NR1H3_HUMAN CRLRKC--RQAGMREECVLSEEQIRLKKLKRQEEEQAHATSLPPRASSPPQILPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPMAPDPHSREAR 1uhl GRFAKLLLRLPALRSIGLKCLEHLFFFKL----------IGDTPIDTFLMEMLEAMSPEQLGMIEKLVAAQQQCNRRSF------------------EAR SSE CHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC------------------CCC VARSPLIC DDD NR1H3_HUMAN QQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQ 1uhl QQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRYNPGSESIT---DFSYNREDFAKAGLQVEFINPIFEFSRAMNELQ SSE CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEC---CCCECHHHHCCCCCCCCCHHHHHHHHHHHHHHC VARSPLIC DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD NR1H3_HUMAN LNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE--- 1uhl LNDAEFALLIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHKILH SSE CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHH VARSPLIC NR1H3_HUMAN -------------- 1uhl RLLQHKILHRLLQD SSE HHHCCCHHHHHHCC VARSPLIC
Varsplic events:
VSP_003664 REMOVE 237-296, affected aminoacids in template: 238-286 Color: Red