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Alternative Splicing Gallery

Detail view for swissprot protein PGM1_RABIT and isoform P00949-2

Template: 3pmg
Sequence Identity (Template - Swissprot): 1.0
Coverage of swissprot protein: 1.0

Alignment

PGM1_RABIT	VKIVTVKTKAYPDQKPGTSGLRKRVKVFQSSTNYAENFIQSIISTVEPAQRQEATLVVGGDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSC
3pmg		VKIVTVKTKAYPDQKPGTSGLRKRVKVFQSSTNYAENFIQSIISTVEPAQRQEATLVVGGDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSC
SSE		CCCEEEECCCCCCCCCECCEEEEEHHHHHHCCCHHHHHHHHHHHCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHH
VARSPLIC	IIIIIIIIIIII           RRRRRRRRRRRR       RRRRRRRRRRRRR        RRRRRRRRRRRRR                        

PGM1_RABIT	IIRKIKAIGGIILTASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKPFTVEIVDSVEAYATMLRN
3pmg		IIRKIKAIGGIILTASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKPFTVEIVDSVEAYATMLRN
SSE		HHHHHCCCEEEEECCCCCCCCCCCEEEEEEEECCCCECCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCHHHHHHHHH
VARSPLIC	                                                                                                    

PGM1_RABIT	IFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKSGEHDFGAAFDGDGDRNMILGKHG
3pmg		IFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKSGEHDFGAAFDGDGDRNMILGKHG
SSE		HCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCHHHEECCCCCCCHHHCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEEHHH
VARSPLIC	                                                                                                    

PGM1_RABIT	FFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSI
3pmg		FFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSI
SSE		CEECHHHHHHHHHHCHHHCHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCEEEECCCEEEECCCCCCCHHHHHHHHHHH
VARSPLIC	                                                                                                    

PGM1_RABIT	LATRKQSVEDILKDHWHKFGRNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYHDPVDGSVSKNQGLRLIFADGSRII
3pmg		LATRKQSVEDILKDHWHKFGRNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYHDPVDGSVSKNQGLRLIFADGSRII
SSE		HHHHCCCHHHHHHHHHHHHCEEEEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEEEEECCEECCCCCCEECCCCEEEEECCCCEEE
VARSPLIC	                                                                                                    

PGM1_RABIT	FRLSGTGSAGATIRLYIDSYEKDNAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT
3pmg		FRLSGTGSAGATIRLYIDSYEKDNAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT
SSE		EEEEECCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCEEC
VARSPLIC

Varsplic events:
VSP_004690 REPLACE 1-12 VKIVTVKTKAYP => EEGPLPLLTIRTAPYH, affected aminoacids in template: 0-11 Color: Yellow
VSP_004692 REPLACE 43-55 ISTVEPAQRQEAT => FFSIDLKDRQGSS, affected aminoacids in template: 42-54 Color: Green
VSP_004691 REPLACE 24-35 RVKVFQSSTNYA => KTYYFEDKPCYL, affected aminoacids in template: 23-34 Color: Green
VSP_004693 REPLACE 64-76 FYMKEAIQLIVRI => YFNKSAIETILQM, affected aminoacids in template: 63-75 Color: Green

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