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Alternative Splicing Gallery

Detail view for swissprot protein LDHA_HUMAN and isoform P00338-2

Template: 1i10
Sequence Identity (Template - Swissprot): 1.0
Coverage of swissprot protein: 1.0

Alignment

LDHA_HUMAN	ATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQ
1i10		ATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIITAGARQQ
SSE		CCHHHHHEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCHHHCCCCEEEECCCHHHHCCCCEEEECCCCCCC
VARSPLIC	                                                                                                    

LDHA_HUMAN	EGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVW
1i10		EGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLLIVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVW
SSE		CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHHHHHHHHCCCHHHCECCEEECCCCCCEECH
VARSPLIC	                                                                                                    

LDHA_HUMAN	SGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGIS
1i10		SGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGIS
SSE		HHCEECCEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEECCEEE
VARSPLIC	                            RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR                           

LDHA_HUMAN	DLVKVTLTSEEEARLKKSADTLWGIQKELQF
1i10		DLVKVTLTSEEEARLKKSADTLWGIQKELQF
SSE		EEECCCCCHHHHHHHHHHHHHHHHHHHHHCC
VARSPLIC

Varsplic events:
VSP_014261 REPLACE 229-273 VHKQVVESAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVS => CRYTLGDPKGAAILKSSDVISFHCLGYNRILGGGCACCPFYLICD, affected aminoacids in template: 228-272 Color: Green

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