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Alternative Splicing Gallery

Detail view for swissprot protein FT_ARATH and isoform Q9SXZ2-2

Template: 1wkp
Sequence Identity (Template - Swissprot): 0.9815951
Coverage of swissprot protein: 0.93142855

Alignment

FT_ARATH	MSINIRDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFYTLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTT
1wkp		-----RDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLNLRPSQVQNKPRVEIGGEDLRNFYTLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTT
SSE		-----CCHHHHCCHHHHCECCCCCCECEEEEECCEECCCCEEECHHHCCCCCEEEECCCCCCCEEEEEEEECCCCECCECCCCCEEEEEEEEEECCCEHH
VARSPLIC	                                                                                                    

FT_ARATH	FGNEIVCYENPSPTAGIHRVVFILFRQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGRRL
1wkp		FGNEIVSYENPSPTAGIHRVVFILFRQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNSQRES-------
SSE		HCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCC-------
VARSPLIC	 RRRRRRRRRRRRRRRRRRRRRDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

Varsplic events:
VSP_004543 REPLACE 102-122 GNEIVCYENPSPTAGIHRVVF => AWQANSVCTRVAPELQHSRVC, affected aminoacids in template: 96-116 Color: Green
VSP_004544 REMOVE 123-175, affected aminoacids in template: 117-162 Color: Red

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