Orland Gonzalez

E-Mail:	gonzalez * at * bio.ifi.lmu.de
Phone:	+49-89-2180-4059
Fax:	+49-89-2180-99-4042
Address:	Teaching and Research Unit Bioinformatics Institut für Informatik Ludwig-Maximilians-Universität München
	Amalienstr. 17, 80333 Munich, Germany
Raum:	201 2. Etage

Research

Host-pathogen interactions (particularly Herpesviruses)
Analysis of RNAi screens for host factors
Metabolic networks (reconstruction & modeling)

Publications

2013

Papers

Samantha J. Griffiths, Manfred Koegl, Chris Boutell, Helen L. Zenner, Colin Crump, Orland Gonzalez, Caroline C. Friedel, Gerald Barry, Kimberley Martin, Marie H. Craigon, Rui Chen, Lakshmi N. Kaza, Even Fossum, John K. Fazakerley, Stacey Efstathiou, Ralf Zimmer, Peter Ghazal, Jürgen Haas. A systematic analysis of host factors reveals a Med23-interferon-lambda regulatory axis against Herpes simplex virus Type 1 replication. PLoS Pathogens, vol 9, no. 8, pp. e1003514, 2013.

BibTex

2011

Papers

Orland Gonzalez, Ralf Zimmer. Contextual analysis of RNAi-based functional screens using interaction networks. Bioinformatics, vol 27, pp. 2707-2713, November 2011.

BibTex

2010

Papers

Orland Gonzalez, Tanja Oberwinkler, Locedie Mansueto, Friedhelm Pfeifer, Eduardo Mendoza, Ralf Zimmer, Dieter Oesterhelt. Characterization of Growth and Metabolism of the Haloalkaliphile Natronomonas pharaonis. PLoS Computational Biology, vol 6, no. 6, pp. e1000799, 2010.

BibTex

2009

Papers

Orland Gonzalez, Susanne Gronau, Friedhelm Pfeiffer, Eduardo Mendoza, Ralf Zimmer, Dieter Oesterhelt. Systems Analysis of Bioenergetics and Growth of the Extreme Halophile Halobacterium salinarum. PloS Computational Biology, vol 5, no. 4, pp. e1000332, 2009.

BibTex

Theses

Orland Gonzalez. Reconstruction, Modeling and Analysis of Haloarcheal Metabolic Networks. PhD Thesis, LMU München, January 2009.

E-Dissertation

BibTex

2008

Papers

Orland Gonzalez, S. Gronau, M. Falb, F. Pfeiffer, E. Mendoza, Ralf Zimmer, D. Oesterhelt. Reconstruction, modeling & analysis of Halobacterium salinarum R-1metabolism. Mol Biosyst, vol 4, no. 2, pp. 148-59, 2008.

BibTex

Orland Gonzalez, Ralf Zimmer. Assigning functional linkages to proteins using phylogenetic profiles and continuous phenotypes. Bioinformatics, vol 24, no. 10, pp. 1257-63, 2008.

BibTex

Michaela Falb, Kerstin Müller, Lisa Königsmaier, Tanja Oberwinkler, Patrick Horn, vonSusanne Gronau, Orland Gonzalez, Friedhelm Pfeiffer, Erich Bornberg-Bauer, Dieter Oesterhelt. Metabolism of halophilic archaea. Extremophiles, vol 12, no. 2, pp. 177-196, 2008.

BibTex

2006

Papers

Orland Gonzalez, Christoph Küper, Kirsten Jung, Prospero Naval, Eduardo Mendoza. Parameter estimation using Simulated Annealing for S-system models of biochemical networks. Bioinformatics, vol 23, no. 4, pp. 480-486, 2006.

BibTex

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